OCA Atlas for 4F4O

4F4O

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

FUC, HEM, NAG, OXY

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, J, D, G	peroxidase activity
C, F, I, L
E, H, B, K	peroxidase activity

Primary reference

Structure of the haptoglobin-haemoglobin complex., Andersen CB, Torvund-Jensen M, Nielsen MJ, de Oliveira CL, Hersleth HP, Andersen NH, Pedersen JS, Andersen GR, Moestrup SK, Nature. 2012 Sep 20;489(7416):456-9. doi: 10.1038/nature11369. Epub 2012 Aug 26. PMID:22922649

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (814 Kb) [Save to disk]

Biological Unit Coordinates (4f4o.pdb1.gz) 402 Kb

Biological Unit Coordinates (4f4o.pdb2.gz) 407 Kb

LPC: Ligand-Protein Contacts for 4F4O

CSU: Contacts of Structural Units for 4F4O

Structure Factors (817 Kb)

Retrieve 4F4O in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4F4O from S2C, [Save to disk]

Re-refined 4f4o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4F4O in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4f4o] [4f4o_A] [4f4o_B] [4f4o_C] [4f4o_D] [4f4o_E] [4f4o_F] [4f4o_G] [4f4o_H] [4f4o_I] [4f4o_J] [4f4o_K] [4f4o_L]

SWISS-PROT database:

Domains found in 4F4O: [CCP] [Tryp_SPc ] by SMART

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