4FK6	JAK1 kinase (JH1 domain) in complex with compound 72	date	2012-06-12
authors	Eigenbrot, C., Steffek, M.
compound		source
symmetry		R_factor R_Free 0.2512
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.20
ligand	0UJ, PTR BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure-based discovery of C-2 substituted imidazo-pyrrolopyridine JAK1 inhibitors with improved selectivity over JAK2., Labadie S, Dragovich PS, Barrett K, Blair WS, Bergeron P, Chang C, Deshmukh G, Eigenbrot C, Ghilardi N, Gibbons P, Hurley CA, Johnson A, Kenny JR, Kohli PB, Kulagowski JJ, Liimatta M, Lupardus PJ, Mendonca R, Murray JM, Pulk R, Shia S, Steffek M, Ubhayakar S, Ultsch M, van Abbema A, Ward S, Zak M, Bioorg Med Chem Lett. 2012 Oct 11. pii: S0960-894X(12)01275-9. doi:, 10.1016/j.bmcl.2012.10.008. PMID:23107482

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk] Biological Unit Coordinates (4fk6.pdb1.gz) 101 Kb Biological Unit Coordinates (4fk6.pdb2.gz) 99 Kb LPC: Ligand-Protein Contacts for 4FK6 CSU: Contacts of Structural Units for 4FK6 Structure Factors (387 Kb) Retrieve 4FK6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4FK6 from S2C, [Save to disk] Re-refined 4fk6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4FK6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4FK6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4FK6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4fk6_A] [4fk6_B] [4fk6] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4FK6: [TyrKc ] by SMART

Other resources with information on 4FK6

Community annotation for 4FK6 at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---