4FLH Crystal structure of human PI3K-gamma in complex with AMG511 date
authors Whittington, D.A., Tang, J., Yakowec, P.
compound source
symmetry
R_factor
R_Free 0.2443
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand 14K, SO4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSelective Class I Phosphoinositide 3-Kinase (PI3K) Inhibitors: Optimization of a Series of Pyridyl-triazines Leading to the Identification of a Clinical Candidate, AMG 511., Norman MH, Liu L, Andrews K, Bo Y, Booker S, Caenepeel S, Cee VJ, D'Angelo ND, Freeman DJ, Herberich B, Hong FT, Jackson C, Jiang J, Lannman B, McCarter JD, Mullady E, Nishimura N, Pettus LH, Reed A, San Miguel T, Smith A, Stec MM, Tadesse S, Tasker A, Aidasani D, Zhu S, Subramanian R, Tamayo NA, Wang L, Whittington DA, Wu B, Wu T, Wurz RP, Yang K, Zalameda L, Zhang N, Hughes P, J Med Chem. 2012 Aug 16. PMID:22897589
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (299 Kb) [Save to disk]
  • Biological Unit Coordinates (4flh.pdb1.gz) 292 Kb
  • LPC: Ligand-Protein Contacts for 4FLH
  • CSU: Contacts of Structural Units for 4FLH
  • Structure Factors (737 Kb)
  • Retrieve 4FLH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FLH from S2C, [Save to disk]
  • Re-refined 4flh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FLH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FLH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FLH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4flh] [4flh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4FLH: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 4FLH
  • Community annotation for 4FLH at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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