4FSL Crystal structure of beta-site app-cleaving enzyme 1 (BACE-DB-MUT) complex with N-(N-(4- acetamido-3-chloro-5-methylbenzyl)carbamimidoyl)-3-(4- methoxyphenyl)-5-methyl-4-isothiazolecarboxamide date
authors Muckelbauer, J.K.
compound source
symmetry
R_factor
R_Free 0.2770
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 0VB, IOD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, E, B


Primary referenceAcyl guanidine inhibitors of beta-secretase (BACE-1): optimization of a micromolar hit to a nanomolar lead via iterative solid- and solution-phase library synthesis., Gerritz SW, Zhai W, Shi S, Zhu S, Toyn JH, Meredith JE Jr, Iben LG, Burton CR, Albright CF, Good AC, Tebben AJ, Muckelbauer JK, Camac DM, Metzler W, Cook LS, Padmanabha R, Lentz KA, Sofia MJ, Poss MA, Macor JE, Thompson LA 3rd, J Med Chem. 2012 Nov 8;55(21):9208-23. doi: 10.1021/jm300931y. Epub 2012 Oct 2. PMID:23030502
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (268 Kb) [Save to disk]
  • Biological Unit Coordinates (4fsl.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (4fsl.pdb2.gz) 70 Kb
  • Biological Unit Coordinates (4fsl.pdb3.gz) 69 Kb
  • Biological Unit Coordinates (4fsl.pdb4.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 4FSL
  • CSU: Contacts of Structural Units for 4FSL
  • Structure Factors (1018 Kb)
  • Retrieve 4FSL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FSL from S2C, [Save to disk]
  • Re-refined 4fsl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FSL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FSL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FSL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fsl_B] [4fsl] [4fsl_E] [4fsl_A] [4fsl_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4FSL
  • Community annotation for 4FSL at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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