4FWI Crystal structure of the nucleotide-binding domain of a dipeptide ABC transporter date 2012-07-01
authors Li, X., Ge, J., Yang, M., Wang, N.
compound source
symmetry
R_factor
R_Free 0.2679
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.89
ligand ATP, MG, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceStructure of the nucleotide-binding domain of a dipeptide ABC transporter reveals a novel iron-sulfur cluster-binding domain., Li X, Zhuo W, Yu J, Ge J, Gu J, Feng Y, Yang M, Wang L, Wang N, Acta Crystallogr D Biol Crystallogr. 2013 Feb;69(Pt 2):256-65. doi:, 10.1107/S0907444912045180. Epub 2013 Jan 19. PMID:23385461
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (4fwi.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 4FWI
  • CSU: Contacts of Structural Units for 4FWI
  • Structure Factors (203 Kb)
  • Retrieve 4FWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FWI from S2C, [Save to disk]
  • Re-refined 4fwi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FWI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FWI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fwi_B] [4fwi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FWI: [AAA ] by SMART
  • Other resources with information on 4FWI
  • Community annotation for 4FWI at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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