4GEM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, ZN	enzyme
Primary reference	Structure and function of Zucchini endoribonuclease in piRNA biogenesis., Nishimasu H, Ishizu H, Saito K, Fukuhara S, Kamatani MK, Bonnefond L, Matsumoto N, Nishizawa T, Nakanaga K, Aoki J, Ishitani R, Siomi H, Siomi MC, Nureki O, Nature. 2012 Nov 8;491(7423):284-7. doi: 10.1038/nature11509. Epub 2012 Oct 14. PMID:23064230

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (4gem.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 4GEM CSU: Contacts of Structural Units for 4GEM Structure Factors (281 Kb) Retrieve 4GEM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GEM from S2C, [Save to disk] Re-refined 4gem structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GEM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gem] [4gem_A] [4gem_B] SWISS-PROT database:

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