4GFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	0YB	enzyme
Gene Ontology	Chain Function Process Component B, A thymidylate kinase activity
Primary reference	In Vivo Validation of Thymidylate Kinase (TMK) with a Rationally Designed, Selective Antibacterial Compound., Keating TA, Newman JV, Olivier NB, Otterson LG, Andrews B, Boriack-Sjodin PA, Breen JN, Doig P, Dumas J, Gangl E, Green OM, Guler SY, Hentemann MF, Joseph-McCarthy D, Kawatkar S, Kutschke A, Loch JT, McKenzie AR, Pradeepan S, Prasad S, Martinez-Botella G, ACS Chem Biol. 2012 Aug 28. PMID:22908966

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (4gfd.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 4GFD CSU: Contacts of Structural Units for 4GFD Structure Factors (649 Kb) Retrieve 4GFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GFD from S2C, [Save to disk] Re-refined 4gfd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gfd] [4gfd_A] [4gfd_B] SWISS-PROT database:

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