4GK3		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	L87	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Optimization of Inhibitors of the Tyrosine Kinase EphB4. 2. Cellular Potency Improvement and Binding Mode Validation by X-ray Crystallography., Lafleur K, Dong J, Huang D, Caflisch A, Nevado C, J Med Chem. 2013 Jan 10;56(1):84-96. doi: 10.1021/jm301187e. Epub 2012 Dec 19. PMID:23253074

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (4gk3.pdb1.gz) 49 Kb LPC: Ligand-Protein Contacts for 4GK3 CSU: Contacts of Structural Units for 4GK3 Structure Factors (491 Kb) Retrieve 4GK3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GK3 from S2C, [Save to disk] Re-refined 4gk3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GK3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gk3] [4gk3_A] SWISS-PROT database: Domain found in 4GK3: [TyrKc ] by SMART

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