4GPK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referencePeptide-binding dependent conformational changes regulate the transcriptional activity of the quorum-sensor NprR., Zouhir S, Perchat S, Nicaise M, Perez J, Guimaraes B, Lereclus D, Nessler S, Nucleic Acids Res. 2013 Jun 22. PMID:23793817
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (703 Kb) [Save to disk]
  • Biological Unit Coordinates (4gpk.pdb1.gz) 236 Kb
  • Biological Unit Coordinates (4gpk.pdb2.gz) 237 Kb
  • Biological Unit Coordinates (4gpk.pdb3.gz) 236 Kb
  • CSU: Contacts of Structural Units for 4GPK
  • Structure Factors (730 Kb)
  • Retrieve 4GPK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GPK from S2C, [Save to disk]
  • Re-refined 4gpk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GPK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gpk] [4gpk_A] [4gpk_B] [4gpk_C] [4gpk_D] [4gpk_E] [4gpk_F] [4gpk_G] [4gpk_H] [4gpk_I] [4gpk_J] [4gpk_K] [4gpk_L] [4gpk_M] [4gpk_N] [4gpk_O] [4gpk_P] [4gpk_Q] [4gpk_R] [4gpk_S] [4gpk_T] [4gpk_U] [4gpk_V] [4gpk_W] [4gpk_X]
  • SWISS-PROT database:
  • Domain found in 4GPK: [TPR ] by SMART

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