4GWI His 62 mutant of the lectin binding domain of lectinolysin complexed with Lewis y date
authors Feil, S.C.
compound source
symmetry
R_factor
R_Free 0.19017
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand CA, FUC, GAL, GOL, MG, NAG enzyme
Primary referenceManipulating the Lewis antigen specificity of the cholesterol-dependent cytolysin lectinolysin., Lawrence SL, Feil SC, Holien JK, Kuiper MJ, Doughty L, Dolezal O, Mulhern TD, Tweten RK, Parker MW, Front Immunol. 2012 Nov 5;3:330. doi: 10.3389/fimmu.2012.00330. eCollection 2012. PMID:23181061
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (4gwi.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 4GWI
  • CSU: Contacts of Structural Units for 4GWI
  • Structure Factors (425 Kb)
  • Retrieve 4GWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GWI from S2C, [Save to disk]
  • Re-refined 4gwi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GWI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GWI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gwi_A] [4gwi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GWI: [FTP ] by SMART
    • Other resources with information on 4GWI
  • Community annotation for 4GWI at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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