4GYD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEC enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, F, A, D, C, B
  • electron transfer activity


    • Primary referenceThe dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy., Diaz-Moreno I, Hulsker R, Skubak P, Foerster JM, Cavazzini D, Finiguerra MG, Diaz-Quintana A, Moreno-Beltran B, Rossi GL, Ullmann GM, Pannu NS, De la Rosa MA, Ubbink M, Biochim Biophys Acta. 2014 Aug;1837(8):1305-15. doi:, 10.1016/j.bbabio.2014.03.009. Epub 2014 Mar 28. PMID:24685428
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (4gyd.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (4gyd.pdb2.gz) 17 Kb
  • Biological Unit Coordinates (4gyd.pdb3.gz) 17 Kb
  • Biological Unit Coordinates (4gyd.pdb4.gz) 17 Kb
  • Biological Unit Coordinates (4gyd.pdb5.gz) 17 Kb
  • Biological Unit Coordinates (4gyd.pdb6.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 4GYD
  • CSU: Contacts of Structural Units for 4GYD
  • Structure Factors (345 Kb)
  • Retrieve 4GYD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GYD from S2C, [Save to disk]
  • Re-refined 4gyd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GYD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gyd] [4gyd_A] [4gyd_B] [4gyd_C] [4gyd_D] [4gyd_E] [4gyd_F]
  • SWISS-PROT database:

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