4GZA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, E, A, B, F, D


G


Primary referenceNeuropilins lock secreted semaphorins onto plexins in a ternary signaling complex., Janssen BJ, Malinauskas T, Weir GA, Cader MZ, Siebold C, Jones EY, Nat Struct Mol Biol. 2012 Dec;19(12):1293-9. doi: 10.1038/nsmb.2416. Epub 2012, Oct 28. PMID:23104057
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (613 Kb) [Save to disk]
  • Biological Unit Coordinates (4gza.pdb1.gz) 1192 Kb
  • LPC: Ligand-Protein Contacts for 4GZA
  • CSU: Contacts of Structural Units for 4GZA
  • Structure Factors (739 Kb)
  • Retrieve 4GZA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GZA from S2C, [Save to disk]
  • Re-refined 4gza structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GZA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gza] [4gza_A] [4gza_B] [4gza_C] [4gza_D] [4gza_E] [4gza_F] [4gza_G] [4gza_H]
  • SWISS-PROT database:
  • Domains found in 4GZA: [CUB] [FA58C] [PSI] [Sema ] by SMART

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