4H3B Crystal Structure of JNK3 in Complex with SAB Peptide date 2012-09-13
authors Nwachukwu, J.C., Laughlin, J.D., Figuera-Losada, M., Cherry, L., Nettles, K.W., LoGrasso, P.V.
compound source
symmetry
R_factor
R_Free 0.2350
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.08
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceStructural Mechanisms of Allostery and Autoinhibition in JNK Family Kinases., Laughlin JD, Nwachukwu JC, Figuera-Losada M, Cherry L, Nettles KW, Lograsso PV, Structure. 2012 Nov 6. pii: S0969-2126(12)00374-7. doi:, 10.1016/j.str.2012.09.021. PMID:23142346
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (4h3b.pdb1.gz) 123 Kb
  • Biological Unit Coordinates (4h3b.pdb2.gz) 124 Kb
  • CSU: Contacts of Structural Units for 4H3B
  • Structure Factors (523 Kb)
  • Retrieve 4H3B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H3B from S2C, [Save to disk]
  • Re-refined 4h3b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4H3B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4H3B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H3B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h3b] [4h3b_D] [4h3b_A] [4h3b_C] [4h3b_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4H3B: [S_TKc ] by SMART
    • Other resources with information on 4H3B
  • Community annotation for 4H3B at PDBWiki (http://pdbwiki.org)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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