4H3U Crystal structure of hypothetical protein with ketosteroid isomerase-like protein fold from Catenulispora acidiphila DSM 44928 date
authors Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Jedrzejczak, R., Joachimiak, A., Anderson, W.F., MCSG, Midwest.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.14313
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.15
ligand ACT, CD, CL, MSE enzyme
Gene CACI
Primary referenceStructural characterization of a hypothetical protein: a potential agent involved in trimethylamine metabolism in Catenulispora acidiphila., Filippova EV, Luan CH, Dunne SF, Kiryukhina O, Minasov G, Shuvalova L, Anderson WF, J Struct Funct Genomics. 2014 Mar;15(1):33-40. doi: 10.1007/s10969-014-9176-z., Epub 2014 Feb 22. PMID:24562475
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (4h3u.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 4H3U
  • CSU: Contacts of Structural Units for 4H3U
  • Structure Factors (1473 Kb)
  • Retrieve 4H3U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H3U from S2C, [Save to disk]
  • Re-refined 4h3u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4H3U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4H3U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H3U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h3u_B] [4h3u] [4h3u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4H3U
  • Community annotation for 4H3U at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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