4H8S Crystal structure of human APPL2BARPH domain date 2012-09-23
authors Martin, J.L., King, G.J.
compound source
symmetry
R_factor
R_Free 0.2559
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.50
Primary referenceMembrane-curvature protein exhibits interdomain flexibility and binds a small GTPase., King GJ, Stoeckli J, Hu SH, Winnen B, Duprez WG, Meoli CC, Junutula JR, Jarrott RJ, James DE, Whitten AE, Martin JL, J Biol Chem. 2012 Oct 10. PMID:23055524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (747 Kb) [Save to disk]
  • Biological Unit Coordinates (4h8s.pdb1.gz) 370 Kb
  • Biological Unit Coordinates (4h8s.pdb2.gz) 372 Kb
  • CSU: Contacts of Structural Units for 4H8S
  • Structure Factors (742 Kb)
  • Retrieve 4H8S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H8S from S2C, [Save to disk]
  • Re-refined 4h8s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4H8S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4H8S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H8S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h8s_B] [4h8s_D] [4h8s_A] [4h8s] [4h8s_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4H8S: [PH ] by SMART
  • Other resources with information on 4H8S
  • Community annotation for 4H8S at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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