4HB3 Crystal structure of CRM1(T539S)-Ran-RanBP1 with weakly bound unmodeled Leptomycin B date
authors Sun, Q., Chook, Y.M.
compound source
symmetry
R_factor
R_Free 0.27601
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand CL, GNP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • intracellular transport of v...

  • B


    C
  • nuclear import signal recept...


  • Primary referenceNuclear export inhibition through covalent conjugation and hydrolysis of Leptomycin B by CRM1., Sun Q, Carrasco YP, Hu Y, Guo X, Mirzaei H, Macmillan J, Chook YM, Proc Natl Acad Sci U S A. 2013 Jan 7. PMID:23297231
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (469 Kb) [Save to disk]
  • Biological Unit Coordinates (4hb3.pdb1.gz) 463 Kb
  • LPC: Ligand-Protein Contacts for 4HB3
  • CSU: Contacts of Structural Units for 4HB3
  • Structure Factors (955 Kb)
  • Retrieve 4HB3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HB3 from S2C, [Save to disk]
  • Re-refined 4hb3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HB3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HB3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HB3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f4hb3, region B:3-219 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hb3_A] [4hb3_B] [4hb3_C] [4hb3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4HB3: [CRM1_C] [IBN_N] [RAN] [RanBD ] by SMART
  • Other resources with information on 4HB3
  • Community annotation for 4HB3 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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