4HHJ Dengue serotype 3 RNA-dependent RNA polymerase date
authors Noble, C.G., Lescar, J.
compound source
symmetry
R_factor
R_Free 0.2092
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.79
ligand P6G, PEG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational flexibility of the dengue virus RNA-dependent RNA polymerase revealed by a complex with an inhibitor., Noble CG, Lim SP, Chen YL, Liew CW, Yap L, Lescar J, Shi PY, J Virol. 2013 Feb 13. PMID:23408636
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (4hhj.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 4HHJ
  • CSU: Contacts of Structural Units for 4HHJ
  • Structure Factors (1511 Kb)
  • Retrieve 4HHJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HHJ from S2C, [Save to disk]
  • Re-refined 4hhj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HHJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HHJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HHJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hhj_A] [4hhj]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4HHJ
  • Community annotation for 4HHJ at PDBWiki (http://pdbwiki.org)

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