OCA Atlas for 4HKJ

4HKJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MSE

enzyme

Gene
Ontology

Chain	Function	Process	Component
N, B, F, J		cellular response to iron io...

Primary reference

Structural Mechanism of ER Retrieval of MHC Class I by Cowpox., McCoy WH 4th, Wang X, Yokoyama WM, Hansen TH, Fremont DH, PLoS Biol. 2012 Nov;10(11):e1001432. doi: 10.1371/journal.pbio.1001432. Epub 2012, Nov 27. PMID:23209377

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (796 Kb) [Save to disk]

Biological Unit Coordinates (4hkj.pdb1.gz) 202 Kb

Biological Unit Coordinates (4hkj.pdb2.gz) 202 Kb

Biological Unit Coordinates (4hkj.pdb3.gz) 202 Kb

Biological Unit Coordinates (4hkj.pdb4.gz) 201 Kb

LPC: Ligand-Protein Contacts for 4HKJ

CSU: Contacts of Structural Units for 4HKJ

Structure Factors (2462 Kb)

Retrieve 4HKJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4HKJ from S2C, [Save to disk]

Re-refined 4hkj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4HKJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4hkj] [4hkj_A] [4hkj_B] [4hkj_C] [4hkj_D] [4hkj_E] [4hkj_F] [4hkj_G] [4hkj_H] [4hkj_I] [4hkj_J] [4hkj_K] [4hkj_L] [4hkj_M] [4hkj_N] [4hkj_O] [4hkj_P]

SWISS-PROT database:

Domain found in 4HKJ: [IGc1 ] by SMART

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