4HNB Crystal Structure of Rhodobacter Sphaeroides LOV protein date 2012-10-19
authors Crane, B.R., Conrad, K.S., Bilwes, A.M.
compound source
symmetry
R_factor
R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.34
ligand FMN, FNR enzyme
note 4HNB (Molecule of the Month:pdb183)
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceLight-Induced Subunit Dissociation by a Light-Oxygen-Voltage Domain Photoreceptor from Rhodobacter sphaeroides., Conrad KS, Bilwes AM, Crane BR, Biochemistry. 2013 Jan 15;52(2):378-91. doi: 10.1021/bi3015373. Epub 2013 Jan 3. PMID:23252338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (4hnb.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (4hnb.pdb2.gz) 30 Kb
  • Biological Unit Coordinates (4hnb.pdb3.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 4HNB
  • CSU: Contacts of Structural Units for 4HNB
  • Structure Factors (321 Kb)
  • Retrieve 4HNB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HNB from S2C, [Save to disk]
  • Re-refined 4hnb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HNB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HNB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HNB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hnb] [4hnb_B] [4hnb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HNB: [PAS ] by SMART
  • Other resources with information on 4HNB
  • Community annotation for 4HNB at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science