4HP9 Crystal structure of the N-terminal truncated PAS domain from the hERG potassium channel date 2012-10-23
authors Adaixo, R., Morais-Cabral, J.H., Harley, C.A.
compound source
symmetry
R_factor
R_Free 0.2380
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.12
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural properties of PAS domains from the KCNH potassium channels., Adaixo R, Harley CA, Castro-Rodrigues AF, Morais-Cabral JH, PLoS One. 2013;8(3):e59265. doi: 10.1371/journal.pone.0059265. Epub 2013 Mar 15. PMID:23555008
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (4hp9.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 4HP9
  • Structure Factors (42 Kb)
  • Retrieve 4HP9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HP9 from S2C, [Save to disk]
  • Re-refined 4hp9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HP9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HP9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HP9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hp9_A] [4hp9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4HP9: [PAC] [PAS ] by SMART
  • Other resources with information on 4HP9
  • Community annotation for 4HP9 at PDBWiki (http://pdbwiki.org)

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