4HV8 Crystal Structure of H2Db-H155A-NPM6I date
authors Gras, S., Twist, K.A., Rossjohn, J.
compound source
symmetry
R_factor
R_Free 0.2358
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B


Primary referencePreemptive priming readily overcomes structure-based mechanisms of virus escape., Valkenburg SA, Gras S, Guillonneau C, Hatton LA, Bird NA, Twist KA, Halim H, Jackson DC, Purcell AW, Turner SJ, Doherty PC, Rossjohn J, Kedzierska K, Proc Natl Acad Sci U S A. 2013 Mar 14. PMID:23493558
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (4hv8.pdb1.gz) 146 Kb
  • Biological Unit Coordinates (4hv8.pdb2.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 4HV8
  • CSU: Contacts of Structural Units for 4HV8
  • Structure Factors (517 Kb)
  • Retrieve 4HV8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HV8 from S2C, [Save to disk]
  • Re-refined 4hv8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HV8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HV8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HV8, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hv8_C] [4hv8_A] [4hv8_D] [4hv8_E] [4hv8_B] [4hv8_F] [4hv8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HV8: [IGc1 ] by SMART
    • Other resources with information on 4HV8
  • Community annotation for 4HV8 at PDBWiki (http://pdbwiki.org)

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