4HZE Crystal structure of human Arginase-2 complexed with inhibitor 9 date
authors Cousido-Siah, A., Mitschler, A., Ruiz, F.X., Whitehouse, D.L., Golebiowski, A., Ji, M., Zhang, M., Beckett, P., Sheeler, R., Andreoli, M., Conway, B., Mahboubi, K., Schroeter, H., Zandt, M.C.Van., Podjarny, A.
compound source
symmetry
R_factor
R_Free 0.1979
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand BEN, BME, MN, X7A enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceDiscovery of (R)-2-Amino-6-borono-2-(2-(piperidin-1-yl)ethyl)hexanoic Acid and Congeners As Highly Potent Inhibitors of Human Arginases I and II for Treatment of Myocardial Reperfusion Injury., Van Zandt MC, Whitehouse DL, Golebiowski A, Ji MK, Zhang M, Beckett RP, Jagdmann GE, Ryder TR, Sheeler R, Andreoli M, Conway B, Mahboubi K, D'Angelo G, Mitschler A, Cousido-Siah A, Ruiz FX, Howard EI, Podjarny AD, Schroeter H, J Med Chem. 2013 Mar 28;56(6):2568-80. doi: 10.1021/jm400014c. Epub 2013 Mar 8. PMID:23472952
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (4hze.pdb1.gz) 165 Kb
  • Biological Unit Coordinates (4hze.pdb2.gz) 57 Kb
  • Biological Unit Coordinates (4hze.pdb3.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 4HZE
  • CSU: Contacts of Structural Units for 4HZE
  • Structure Factors (1333 Kb)
  • Retrieve 4HZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HZE from S2C, [Save to disk]
  • Re-refined 4hze structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HZE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HZE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hze] [4hze_B] [4hze_C] [4hze_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4HZE
  • Community annotation for 4HZE at PDBWiki (http://pdbwiki.org)

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