4I1L Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function date 2012-11-21
authors Song, X.M., Greene, M.I., Zhou, Z.C.
compound source
symmetry
R_factor
R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand ACT, MG, SO4 enzyme
Primary referenceStructural and biological features of FOXP3 dimerization relevant to regulatory T cell function., Song X, Li B, Xiao Y, Chen C, Wang Q, Liu Y, Berezov A, Xu C, Gao Y, Li Z, Wu SL, Cai Z, Zhang H, Karger BL, Hancock WW, Wells AD, Zhou Z, Greene MI, Cell Rep. 2012 Jun 28;1(6):665-75. Epub 2012 Jun 15. PMID:22813742
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (4i1l.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 4I1L
  • CSU: Contacts of Structural Units for 4I1L
  • Structure Factors (41 Kb)
  • Retrieve 4I1L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I1L from S2C, [Save to disk]
  • Re-refined 4i1l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4I1L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4I1L
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I1L, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i1l_A] [4i1l]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4I1L: [ZnF_C2H2 ] by SMART
    • Other resources with information on 4I1L
  • Community annotation for 4I1L at PDBWiki (http://pdbwiki.org)
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