4I7T T4 Lysozyme L99A/M102H with 2-bromo-5-hydroxybenzaldehyde bound date 2012-11-30
authors Merski, M., Shoichet, B.K.
compound source
symmetry
R_factor
R_Free 0.1985
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.55
ligand 1DW, ACT, BME, HED, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Impact of Introducing a Histidine into an Apolar Cavity Site on Docking and Ligand Recognition., Merski M, Shoichet BK, J Med Chem. 2013 Mar 20. PMID:23473072
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4i7t.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (4i7t.pdb2.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 4I7T
  • CSU: Contacts of Structural Units for 4I7T
  • Structure Factors (379 Kb)
  • Retrieve 4I7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I7T from S2C, [Save to disk]
  • Re-refined 4i7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4I7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4I7T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I7T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i7t] [4i7t_A] [4i7t_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4I7T
  • Community annotation for 4I7T at PDBWiki (http://pdbwiki.org)

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