OCA Atlas for 4I7Z

4I7Z

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

1E2, 8K6, BCR, CD, CLA, HEM, MYS, OCT, OZ2, UMQ

enzyme

Gene
Ontology

Chain	Function	Process	Component
A
B
C	electron transfer activity
D	electron transporter, transf...
E	electron transfer activity electron transporter, transf...
F	electron transfer activity
G	electron transporter, transf...
H	electron transfer activity electron transporter, transf...

Primary reference

Lipid-induced conformational changes within the cytochrome b6f complex of oxygenic photosynthesis., Hasan SS, Stofleth JT, Yamashita E, Cramer WA, Biochemistry. 2013 Apr 16;52(15):2649-54. doi: 10.1021/bi301638h. Epub 2013 Apr, 5. PMID:23514009

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (438 Kb) [Save to disk]

Biological Unit Coordinates (4i7z.pdb1.gz) 844 Kb

LPC: Ligand-Protein Contacts for 4I7Z

CSU: Contacts of Structural Units for 4I7Z

Structure Factors (1058 Kb)

Retrieve 4I7Z in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4I7Z from S2C, [Save to disk]

Re-refined 4i7z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4I7Z in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4i7z] [4i7z_A] [4i7z_B] [4i7z_C] [4i7z_D] [4i7z_E] [4i7z_F] [4i7z_G] [4i7z_H]

SWISS-PROT database:

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