4I92 Transferase date Dec 04, 2012
title Structure Of The Bsk8 Kinase Domain
authors C.Gruetter, D.Rauh
compound source
Molecule: Probable Serinethreonine-Protein Kinase At5g4126
Chain: A
Fragment: Bsk8 Fragment, Unp Residues 40-328
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress,Thale-Cress
Organism_taxid: 3702
Gene: At5g41260, K1o13.5
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptriex-2-Based Multi-Host Vector
symmetry Space Group: P 1 21 1
R_factor 0.160 R_Free 0.183
length a length b length c angle alpha angle beta angle gamma
35.090 76.990 50.570 90.00 104.86 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CL enzyme Transferase E.C. BRENDA

Primary referenceStructural Characterization of the RLCK Family Member BSK8: A Pseudokinase with an Unprecedented Architecture., Grutter C, Sreeramulu S, Sessa G, Rauh D, J Mol Biol. 2013 Aug 2. pii: S0022-2836(13)00482-8. doi:, 10.1016/j.jmb.2013.07.034. PMID:23911552
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4i92.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4I92
  • CSU: Contacts of Structural Units for 4I92
  • Structure Factors (228 Kb)
  • Retrieve 4I92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I92 from S2C, [Save to disk]
  • Re-refined 4i92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4I92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4I92
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4I92, from MSDmotif at EBI
  • Fold representative 4i92 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i92_A] [4i92]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4I92: [STYKc ] by SMART
  • Other resources with information on 4I92
  • Community annotation for 4I92 at PDBWiki (http://pdbwiki.org)

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