4I9X	Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2	date
authors	Nemcovicova, I., Zajonc, D.M.
compound		source
symmetry		R_factor R_Free 0.27422
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.10
ligand	CA, MSE, NA, NAG	enzyme
Gene Ontology	Chain Function Process Component D, C
Primary reference	Structure of Human Cytomegalovirus UL141 Binding to TRAIL-R2 Reveals Novel, Non-canonical Death Receptor Interactions., Nemcovicova I, Benedict CA, Zajonc DM, PLoS Pathog. 2013 Mar;9(3):e1003224. doi: 10.1371/journal.ppat.1003224. Epub 2013, Mar 21. PMID:23555243

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk] Biological Unit Coordinates (4i9x.pdb1.gz) 100 Kb LPC: Ligand-Protein Contacts for 4I9X CSU: Contacts of Structural Units for 4I9X Structure Factors (769 Kb) Retrieve 4I9X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4I9X from S2C, [Save to disk] Re-refined 4i9x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4I9X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4I9X

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4I9X, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4i9x] [4i9x_C] [4i9x_B] [4i9x_A] [4i9x_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4I9X: [IG] [TNFR ] by SMART

Other resources with information on 4I9X

Community annotation for 4I9X at PDBWiki (http://pdbwiki.org)

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