4IA5 Hydratase from Lactobacillus acidophilus - SeMet derivative (apo LAH) date 2012-12-06
authors Khoshnevis, S., Neumann, P., Ficner, R.
compound source
symmetry
R_factor
R_Free 0.2585
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.22
ligand GOL, K, MES, MPD, MSE, NA, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure analysis of a fatty acid double-bond hydratase from Lactobacillus acidophilus., Volkov A, Khoshnevis S, Neumann P, Herrfurth C, Wohlwend D, Ficner R, Feussner I, Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):648-57. doi:, 10.1107/S0907444913000991. Epub 2013 Mar 14. PMID:23519674
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (421 Kb) [Save to disk]
  • Biological Unit Coordinates (4ia5.pdb1.gz) 409 Kb
  • LPC: Ligand-Protein Contacts for 4IA5
  • CSU: Contacts of Structural Units for 4IA5
  • Structure Factors (2741 Kb)
  • Retrieve 4IA5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IA5 from S2C, [Save to disk]
  • Re-refined 4ia5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IA5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IA5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IA5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ia5] [4ia5_B] [4ia5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IA5
  • Community annotation for 4IA5 at PDBWiki (http://pdbwiki.org)

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