4IBW Human p53 core domain with hot spot mutation R273H and second-site suppressor mutation T284R in sequence-specific complex with DNA date
authors Eldar, A., Rozenberg, H., Diskin-Posner, Y., Shakked, Z.
compound source
symmetry
R_factor
R_Free 0.1876
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.79
ligand EDO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions., Eldar A, Rozenberg H, Diskin-Posner Y, Rohs R, Shakked Z, Nucleic Acids Res. 2013 Jul 17. PMID:23863845
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (4ibw.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 4IBW
  • CSU: Contacts of Structural Units for 4IBW
  • Structure Factors (346 Kb)
  • Retrieve 4IBW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IBW from S2C, [Save to disk]
  • Re-refined 4ibw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4IBW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4IBW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IBW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ibw] [4ibw_B] [4ibw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4IBW
  • Community annotation for 4IBW at PDBWiki (http://pdbwiki.org)

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