4II1 Crystal structure of the zinc finger of ZGPAT date 2012-12-19
authors Bian, C., Tempel, W., Dong, A., Chao, X., Fu, M., Wernimont, A.K., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Min, J., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2416
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.65
ligand UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (4ii1.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (4ii1.pdb2.gz) 23 Kb
  • Biological Unit Coordinates (4ii1.pdb3.gz) 20 Kb
  • Biological Unit Coordinates (4ii1.pdb4.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 4II1
  • CSU: Contacts of Structural Units for 4II1
  • Structure Factors (1072 Kb)
  • Retrieve 4II1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4II1 from S2C, [Save to disk]
  • Re-refined 4ii1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4II1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4II1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4II1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ii1_C] [4ii1_D] [4ii1_B] [4ii1_A] [4ii1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4II1: [ZnF_C3H1 ] by SMART
    • Other resources with information on 4II1
  • Community annotation for 4II1 at PDBWiki (http://pdbwiki.org)

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