4ILD Crystal structure of truncated Bovine viral diarrhea virus 1 E2 envelope protein date
authors Modis, Y., Li, Y., Wang, J.
compound source
symmetry
R_factor
R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.27
ligand CA, IUM, NAG enzyme
Primary referenceCrystal structure of glycoprotein E2 from bovine viral diarrhea virus., Li Y, Wang J, Kanai R, Modis Y, Proc Natl Acad Sci U S A. 2013 Apr 8. PMID:23569276
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (4ild.pdb1.gz) 164 Kb
  • LPC: Ligand-Protein Contacts for 4ILD
  • CSU: Contacts of Structural Units for 4ILD
  • Structure Factors (168 Kb)
  • Retrieve 4ILD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ILD from S2C, [Save to disk]
  • Re-refined 4ild structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ILD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ILD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ILD, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ild_A] [4ild] [4ild_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ILD
  • Community annotation for 4ILD at PDBWiki (http://pdbwiki.org)

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