4IZN Structure of pcDronpa-A69T mutant date 2013-01-30
authors Zitter, E.De., Bich, N.Nguyen., Meervelt, L.Van., Moeyaert, B.
compound source
symmetry
R_factor
R_Free 0.2453
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.15
ligand CR8, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceGreen-to-Red Photoconvertible Dronpa Mutant for Multimodal Super-resolution Fluorescence Microscopy., Moeyaert B, Nguyen Bich N, De Zitter E, Rocha S, Clays K, Mizuno H, van Meervelt L, Hofkens J, Dedecker P, ACS Nano. 2014 Jan 21. PMID:24410188
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (466 Kb) [Save to disk]
  • Biological Unit Coordinates (4izn.pdb1.gz) 153 Kb
  • Biological Unit Coordinates (4izn.pdb2.gz) 155 Kb
  • Biological Unit Coordinates (4izn.pdb3.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 4IZN
  • CSU: Contacts of Structural Units for 4IZN
  • Structure Factors (6165 Kb)
  • Retrieve 4IZN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IZN from S2C, [Save to disk]
  • Re-refined 4izn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IZN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IZN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IZN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4izn_H] [4izn_G] [4izn_A] [4izn_L] [4izn_K] [4izn_C] [4izn_E] [4izn_B] [4izn_D] [4izn_F] [4izn_J] [4izn] [4izn_I]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IZN
  • Community annotation for 4IZN at PDBWiki (http://pdbwiki.org)

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