4J1C CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH 5-Cyano-pyridine-2-carboxylic acid [3-((S)-2-amino-5,5-difluoro-4-fluoromethyl-5,6-dihydro-4H-[1,3]oxazin-4-yl)-4-fluoro-phenyl]-amide date
authors Kuglstatter, A., Stihle, M.
compound source
R_Free 0.21718
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.01
ligand 1HO, DMS, NA enzyme

Primary referencebeta-Secretase (BACE1) Inhibitors with High In Vivo Efficacy Suitable for Clinical Evaluation in Alzheimer's Disease., Hilpert H, Guba W, Woltering TJ, Wostl W, Pinard E, Mauser H, Mayweg AV, Rogers-Evans M, Humm R, Krummenacher D, Muser T, Schnider C, Jacobsen H, Ozmen L, Bergadano A, Banner DW, Hochstrasser R, Kuglstatter A, David-Pierson P, Fischer H, Polara A, Narquizian R, J Med Chem. 2013 Apr 16. PMID:23590342
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (4j1c.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 4J1C
  • CSU: Contacts of Structural Units for 4J1C
  • Structure Factors (475 Kb)
  • Retrieve 4J1C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J1C from S2C, [Save to disk]
  • Re-refined 4j1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4J1C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4J1C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J1C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j1c] [4j1c_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4J1C
  • Community annotation for 4J1C at PDBWiki (http://pdbwiki.org)

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