4JAM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GOL, SO4 enzyme
Primary referenceCo-evolution of a broadly neutralizing HIV-1 antibody and founder virus., Liao HX, Lynch R, Zhou T, Gao F, Alam SM, Boyd SD, Fire AZ, Roskin KM, Schramm CA, Zhang Z, Zhu J, Shapiro L, Becker J, Benjamin B, Blakesley R, Bouffard G, Brooks S, Coleman H, Dekhtyar M, Gregory M, Guan X, Gupta J, Han J, Hargrove A, Ho SL, Johnson T, Legaspi R, Lovett S, Maduro Q, Masiello C, Maskeri B, McDowell J, Montemayor C, Mullikin J, Park M, Riebow N, Schandler K, Schmidt B, Sison C, Stantripop M, Thomas J, Thomas P, Vemulapalli M, Young A, Mullikin JC, Gnanakaran S, Hraber P, Wiehe K, Kelsoe G, Yang G, Xia SM, Montefiori DC, Parks R, Lloyd KE, Scearce RM, Soderberg KA, Cohen M, Kamanga G, Louder MK, Tran LM, Chen Y, Cai F, Chen S, Moquin S, Du X, Joyce MG, Srivatsan S, Zhang B, Zheng A, Shaw GM, Hahn BH, Kepler TB, Korber BT, Kwong PD, Mascola JR, Haynes BF, Nature. 2013 Apr 3. doi: 10.1038/nature12053. PMID:23552890
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (410 Kb) [Save to disk]
  • Biological Unit Coordinates (4jam.pdb1.gz) 203 Kb
  • Biological Unit Coordinates (4jam.pdb2.gz) 204 Kb
  • LPC: Ligand-Protein Contacts for 4JAM
  • CSU: Contacts of Structural Units for 4JAM
  • Structure Factors (1346 Kb)
  • Retrieve 4JAM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JAM from S2C, [Save to disk]
  • Re-refined 4jam structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JAM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jam] [4jam_A] [4jam_B] [4jam_H] [4jam_L]
  • SWISS-PROT database:
  • Domains found in 4JAM: [IG_like] [IGv ] by SMART

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