4JFY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PG4 enzyme
Primary referenceNature-inspired design of motif-specific antibody scaffolds., Koerber JT, Thomsen ND, Hannigan BT, Degrado WF, Wells JA, Nat Biotechnol. 2013 Aug 18. doi: 10.1038/nbt.2672. PMID:23955275
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk]
  • Biological Unit Coordinates (4jfy.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (4jfy.pdb2.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 4JFY
  • CSU: Contacts of Structural Units for 4JFY
  • Structure Factors (304 Kb)
  • Retrieve 4JFY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JFY from S2C, [Save to disk]
  • Re-refined 4jfy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JFY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jfy] [4jfy_A] [4jfy_B] [4jfy_H] [4jfy_L]
  • SWISS-PROT database:
  • Domains found in 4JFY: [IG_like] [IGv ] by SMART

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