4JIB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1L6, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B, D


Primary referenceDiscovery of potent, selective, bioavailable phosphodiesterase 2 (PDE2) inhibitors active in an osteoarthritis pain model, Part I: Transformation of selective pyrazolodiazepinone phosphodiesterase 4 (PDE4) inhibitors into selective PDE2 inhibitors., Plummer MS, Cornicelli J, Roark H, Skalitzky DJ, Stankovic CJ, Bove S, Pandit J, Goodman A, Hicks J, Shahripour A, Beidler D, Lu XK, Sanchez B, Whitehead C, Sarver R, Braden T, Gowan R, Shen XQ, Welch K, Ogden A, Sadagopan N, Baum H, Miller H, Banotai C, Spessard C, Lightle S, Bioorg Med Chem Lett. 2013 Mar 28. pii: S0960-894X(13)00400-9. doi:, 10.1016/j.bmcl.2013.03.072. PMID:23582272
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk]
  • Biological Unit Coordinates (4jib.pdb1.gz) 245 Kb
  • LPC: Ligand-Protein Contacts for 4JIB
  • CSU: Contacts of Structural Units for 4JIB
  • Structure Factors (3166 Kb)
  • Retrieve 4JIB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JIB from S2C, [Save to disk]
  • Re-refined 4jib structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JIB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jib] [4jib_A] [4jib_B] [4jib_C] [4jib_D]
  • SWISS-PROT database:
  • Domain found in 4JIB: [HDc ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science