4JKP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, MAN, NAG, PCA enzyme
Gene
Ontology
ChainFunctionProcessComponent
G


Primary referenceRestricting HIV-1 pathways for escape using rationally designed anti-HIV-1 antibodies., Diskin R, Klein F, Horwitz JA, Halper-Stromberg A, Sather DN, Marcovecchio PM, Lee T, West AP Jr, Gao H, Seaman MS, Stamatatos L, Nussenzweig MC, Bjorkman PJ, J Exp Med. 2013 Jun 3;210(6):1235-49. doi: 10.1084/jem.20130221. Epub 2013 May, 27. PMID:23712429
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (4jkp.pdb1.gz) 258 Kb
  • LPC: Ligand-Protein Contacts for 4JKP
  • CSU: Contacts of Structural Units for 4JKP
  • Structure Factors (481 Kb)
  • Retrieve 4JKP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JKP from S2C, [Save to disk]
  • Re-refined 4jkp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JKP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jkp] [4jkp_G] [4jkp_H] [4jkp_L]
  • SWISS-PROT database:
  • Domains found in 4JKP: [IG_like] [IGv ] by SMART

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