4K79 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand A2G, GAL enzyme
Primary referenceRecognition of the Thomsen-Friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor., Luo M, Velikovsky CA, Yang X, Siddiqui MA, Hong X, Barchi JJ, Gildersleeve JC, Pancer Z, Mariuzza RA, J Biol Chem. 2013 Jun 19. PMID:23782692
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (4k79.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 4K79
  • CSU: Contacts of Structural Units for 4K79
  • Structure Factors (564 Kb)
  • Retrieve 4K79 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4K79 from S2C, [Save to disk]
  • Re-refined 4k79 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4K79 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4k79] [4k79_A] [4k79_B] [4k79_C] [4k79_D]
  • SWISS-PROT database:
  • Domains found in 4K79: [LRR] [LRRNT] [LRR_TYP ] by SMART

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