4KBO Crystal structure of the human Mortalin (GRP75) ATPase domain in the apo form date 2013-04-23
authors Amick, J., Page, R.C., Nix, J.C., Misra, S.
compound source
symmetry
R_factor
R_Free 0.2714
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand NA enzyme
Primary referenceCrystal structure of the nucleotide-binding domain of mortalin, the mitochondrial Hsp70 chaperone., Amick J, Schlanger SE, Wachnowsky C, Moseng MA, Emerson CC, Dare M, Luo WI, Ithychanda SS, Nix JC, Cowan JA, Page RC, Misra S, Protein Sci. 2014 Mar 29. doi: 10.1002/pro.2466. PMID:24687350
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (4kbo.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 4KBO
  • CSU: Contacts of Structural Units for 4KBO
  • Structure Factors (63 Kb)
  • Retrieve 4KBO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KBO from S2C, [Save to disk]
  • Re-refined 4kbo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4KBO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4KBO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KBO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4kbo_A] [4kbo]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4KBO
  • Community annotation for 4KBO at PDBWiki (http://pdbwiki.org)

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