4KOD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP	enzyme
Gene Ontology	Chain Function Process Component F, H, K, J, B, G, C, L, A, D, E, I
Primary reference	Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants., Tang WK, Xia D, J Biol Chem. 2013 Dec 20;288(51):36624-35. doi: 10.1074/jbc.M113.488924. Epub, 2013 Nov 6. PMID:24196964

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1790 Kb) [Save to disk] Biological Unit Coordinates (4kod.pdb1.gz) 888 Kb Biological Unit Coordinates (4kod.pdb2.gz) 892 Kb LPC: Ligand-Protein Contacts for 4KOD CSU: Contacts of Structural Units for 4KOD Structure Factors (1999 Kb) Retrieve 4KOD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4KOD from S2C, [Save to disk] Re-refined 4kod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4KOD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4kod] [4kod_A] [4kod_B] [4kod_C] [4kod_D] [4kod_E] [4kod_F] [4kod_G] [4kod_H] [4kod_I] [4kod_J] [4kod_K] [4kod_L] SWISS-PROT database: Domains found in 4KOD: [AAA] [CDC48_2] [CDC48_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---