4KS1 Influenza neuraminidase in complex with antiviral compound (3S,4R,5R)-4-(acetylamino)-3-amino-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid date 2013-05-17
authors Kerry, P.S., Russell, R.J.M.
compound source
symmetry
R_factor
R_Free 0.2010
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand 2H8, CA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for a class of nanomolar influenza A neuraminidase inhibitors., Kerry PS, Mohan S, Russell RJ, Bance N, Niikura M, Pinto BM, Sci Rep. 2013 Oct 16;3:2871. doi: 10.1038/srep02871. PMID:24129600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4ks1.pdb1.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 4KS1
  • CSU: Contacts of Structural Units for 4KS1
  • Structure Factors (366 Kb)
  • Retrieve 4KS1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KS1 from S2C, [Save to disk]
  • Re-refined 4ks1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4KS1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4KS1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KS1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ks1] [4ks1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4KS1
  • Community annotation for 4KS1 at PDBWiki (http://pdbwiki.org)

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