4KWE GDP-bound, double-stranded, curved FtsZ protofilament structure date 2013-05-23
authors Li, Y., Hsin, J., Zhao, L., Cheng, Y., Shang, W., Huang, K.C., Wang, H.W., Ye, S.
compound source
symmetry
R_factor
R_Free 0.26749
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.91
ligand GDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceFtsZ protofilaments use a hinge-opening mechanism for constrictive force generation., Li Y, Hsin J, Zhao L, Cheng Y, Shang W, Huang KC, Wang HW, Ye S, Science. 2013 Jul 26;341(6144):392-5. doi: 10.1126/science.1239248. PMID:23888039
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (4kwe.pdb1.gz) 95 Kb
  • Biological Unit Coordinates (4kwe.pdb2.gz) 92 Kb
  • Biological Unit Coordinates (4kwe.pdb3.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 4KWE
  • CSU: Contacts of Structural Units for 4KWE
  • Structure Factors (967 Kb)
  • Retrieve 4KWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KWE from S2C, [Save to disk]
  • Re-refined 4kwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4KWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4KWE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KWE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4kwe_C] [4kwe_B] [4kwe] [4kwe_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4KWE: [Tubulin] [Tubulin_C ] by SMART
    • Other resources with information on 4KWE
  • Community annotation for 4KWE at PDBWiki (http://pdbwiki.org)

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