4L29	Structure of wtMHC class I with NY-ESO1 double mutant	date	2013-06-04
authors	Halabelian, L., Giorgetti, S., Bellotti, V., Bolognesi, M., Ricagno, S.
compound		source
symmetry		R_factor R_Free 0.20054
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.09
ligand	CL, GOL	enzyme
Gene	HLA ; NM
Gene Ontology	Chain Function Process Component F, J, T, X, N, P, B, V, Z, H, b, D, R, L cellular response to iron io...
Primary reference	Class I Major Histocomapatibility Complex: the Trojan horse for secretion of amyloidogenic beta2-microglobulin., Halabelian L, Ricagno S, Giorgetti S, Santambrogio C, Barbiroli A, Pellegrino S, Achour A, Grandori R, Marchese L, Raimondi S, Mangione PP, Esposito G, Al-Shawi R, Simons JP, Speck I, Stoppini M, Bolognesi M, Bellotti V, J Biol Chem. 2013 Dec 13. PMID:24338476

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1822 Kb) [Save to disk] Biological Unit Coordinates (4l29.pdb1.gz) 138 Kb Biological Unit Coordinates (4l29.pdb2.gz) 139 Kb Biological Unit Coordinates (4l29.pdb3.gz) 139 Kb Biological Unit Coordinates (4l29.pdb4.gz) 139 Kb Biological Unit Coordinates (4l29.pdb5.gz) 139 Kb Biological Unit Coordinates (4l29.pdb6.gz) 140 Kb Biological Unit Coordinates (4l29.pdb7.gz) 139 Kb Biological Unit Coordinates (4l29.pdb8.gz) 139 Kb Biological Unit Coordinates (4l29.pdb9.gz) 139 Kb LPC: Ligand-Protein Contacts for 4L29 CSU: Contacts of Structural Units for 4L29 Structure Factors (2917 Kb) Retrieve 4L29 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4L29 from S2C, [Save to disk] Re-refined 4l29 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4L29 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4L29

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4L29, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4l29_o] [4l29_g] [4l29_R] [4l29_Q] [4l29_j] [4l29_I] [4l29_a] [4l29_S] [4l29_e] [4l29_h] [4l29_f] [4l29_U] [4l29_Z] [4l29_B] [4l29] [4l29_W] [4l29_O] [4l29_V] [4l29_m] [4l29_H] [4l29_n] [4l29_C] [4l29_K] [4l29_k] [4l29_T] [4l29_E] [4l29_q] [4l29_N] [4l29_p] [4l29_b] [4l29_A] [4l29_Y] [4l29_J] [4l29_G] [4l29_l] [4l29_P] [4l29_D] [4l29_c] [4l29_L] [4l29_i] [4l29_X] [4l29_F] [4l29_M] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4L29: [IGc1 ] by SMART

Other resources with information on 4L29

Community annotation for 4L29 at PDBWiki (http://pdbwiki.org)

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