OCA Atlas for 4LGD

4LGD

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ANP, MG, NA, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, B, A, D
E, H, F, G

Primary reference

Structural Basis for Autoactivation of Human Mst2 Kinase and Its Regulation by RASSF5., Ni L, Li S, Yu J, Min J, Brautigam CA, Tomchick DR, Pan D, Luo X, Structure. 2013 Aug 20. pii: S0969-2126(13)00258-X. doi:, 10.1016/j.str.2013.07.008. PMID:23972470

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (793 Kb) [Save to disk]

Biological Unit Coordinates (4lgd.pdb1.gz) 205 Kb

Biological Unit Coordinates (4lgd.pdb2.gz) 203 Kb

Biological Unit Coordinates (4lgd.pdb3.gz) 192 Kb

Biological Unit Coordinates (4lgd.pdb4.gz) 192 Kb

Biological Unit Coordinates (4lgd.pdb5.gz) 393 Kb

Biological Unit Coordinates (4lgd.pdb6.gz) 391 Kb

LPC: Ligand-Protein Contacts for 4LGD

CSU: Contacts of Structural Units for 4LGD

Structure Factors (405 Kb)

Retrieve 4LGD in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4LGD from S2C, [Save to disk]

Re-refined 4lgd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4LGD in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4lgd] [4lgd_A] [4lgd_B] [4lgd_C] [4lgd_D] [4lgd_E] [4lgd_F] [4lgd_G] [4lgd_H]

SWISS-PROT database:

Domain found in 4LGD: [S_TKc ] by SMART

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