4LL8 Motor Protein Transport Protein date Jul 09, 2013
title Complex Of Carboxy Terminal Domain Of Myo4p And She3p Middle
authors H.Shi, N.Singh, F.Esselborn, G.Blobel
compound source
Molecule: Myosin-4
Chain: A
Fragment: Unp P32492 Residues 918-1073, 1089-1471
Synonym: Swi5-Dependent Ho Expression Protein 1
Engineered: Yes
Mutation: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Myo4, She1, Yal029c, Fun22
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Swi5-Dependent Ho Expression Protein 3
Chain: E, B
Fragment: Unp P38272 Residues 81-311
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: She3, Ybr130c, Ybr1005
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.224 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
272.013 38.116 183.991 90.00 125.24 90.00
method X-Ray Diffractionresolution 3.58 Å
Gene
Ontology
ChainFunctionProcessComponent
E, B


Primary referenceStructure of a myosin*adaptor complex and pairing by cargo., Shi H, Singh N, Esselborn F, Blobel G, Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):E1082-90. doi:, 10.1073/pnas.1401428111. Epub 2014 Feb 12. PMID:24522109
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (4ll8.pdb1.gz) 109 Kb
  • CSU: Contacts of Structural Units for 4LL8
  • Structure Factors (212 Kb)
  • Retrieve 4LL8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LL8 from S2C, [Save to disk]
  • Re-refined 4ll8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LL8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LL8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4LL8, from MSDmotif at EBI
  • Fold representative 4ll8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ll8] [4ll8_E] [4ll8_B] [4ll8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4LL8: [DIL ] by SMART
  • Other resources with information on 4LL8
  • Community annotation for 4LL8 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science