OCA Atlas for 4LLF

4LLF

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
J, B, M, F, A, N, O, G, D, P, K, I, H, E, L

Primary reference

Atomic structure of cucumber necrosis virus and the role of the capsid in vector transmission., Li M, Kakani K, Katpally U, Johnson S, Rochon D, Smith TJ, J Virol. 2013 Nov;87(22):12166-75. doi: 10.1128/JVI.01965-13. Epub 2013 Sep 4. PMID:24006433

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (698 Kb) [Save to disk]

Biological Unit Coordinates (4llf.pdb1.gz) 8143 Kb

LPC: Ligand-Protein Contacts for 4LLF

CSU: Contacts of Structural Units for 4LLF

Structure Factors (1446 Kb)

Retrieve 4LLF in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4LLF from S2C, [Save to disk]

Re-refined 4llf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4LLF in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4llf] [4llf_A] [4llf_B] [4llf_D] [4llf_E] [4llf_F] [4llf_G] [4llf_H] [4llf_I] [4llf_J] [4llf_K] [4llf_L] [4llf_M] [4llf_N] [4llf_O] [4llf_P]

SWISS-PROT database:

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