4LOX Crystal structure of the I-SmaMI LAGLIDADG homing endonuclease bound to cleaved DNA date
authors Chik, J., Shen, B., Stoddard, B.
compound source
symmetry
R_factor
R_Free 0.27697
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.98
ligand MG enzyme
Gene SMAC
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (4lox.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 4LOX
  • CSU: Contacts of Structural Units for 4LOX
  • Structure Factors (468 Kb)
  • Retrieve 4LOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LOX from S2C, [Save to disk]
  • Re-refined 4lox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LOX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LOX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lox_A] [4lox_C] [4lox_E] [4lox] [4lox_D] [4lox_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LOX
  • Community annotation for 4LOX at PDBWiki (http://pdbwiki.org)

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