4LQG X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor CTT1056 date
authors Barinka, C., Skultetyova, L.
compound source
symmetry
R_factor
R_Free 0.18212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.77
ligand BMA, CA, CL, CTW, FUC, MAN, NAG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-Activity Relationship of F-Labeled Phosphoramidate Peptidomimetic Prostate-Specific Membrane Antigen (PSMA)-Targeted Inhibitor Analogues for PET Imaging of Prostate Cancer., Dannoon S, Ganguly T, Cahaya H, Geruntho JJ, Galliher MS, Beyer SK, Choy CJ, Hopkins MR, Regan M, Blecha JE, Skultetyova L, Drake CR, Jivan S, Barinka C, Jones EF, Berkman CE, VanBrocklin HF, J Med Chem. 2016 Jun 13. PMID:27228467
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (279 Kb) [Save to disk]
  • Biological Unit Coordinates (4lqg.pdb1.gz) 539 Kb
  • LPC: Ligand-Protein Contacts for 4LQG
  • CSU: Contacts of Structural Units for 4LQG
  • Structure Factors (631 Kb)
  • Retrieve 4LQG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LQG from S2C, [Save to disk]
  • Re-refined 4lqg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LQG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LQG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LQG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lqg] [4lqg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LQG
  • Community annotation for 4LQG at PDBWiki (http://pdbwiki.org)

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