4LUD Crystal Structure of HCK in complex with the fluorescent compound SKF86002 date
authors Parker, L.J., Tanaka, A., Handa, N., Honda, K., Tomabechi, Y., Shirouzu, M., Yokoyama, S.
compound source
symmetry
R_factor
R_Free 0.2607
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand CA, CL, GOL, PTR, SK8 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]
  • Biological Unit Coordinates (4lud.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (4lud.pdb2.gz) 141 Kb
  • LPC: Ligand-Protein Contacts for 4LUD
  • CSU: Contacts of Structural Units for 4LUD
  • Structure Factors (235 Kb)
  • Retrieve 4LUD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LUD from S2C, [Save to disk]
  • Re-refined 4lud structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LUD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LUD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LUD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lud_A] [4lud_B] [4lud]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LUD: [SH2] [SH3] [TyrKc ] by SMART
    • Other resources with information on 4LUD
  • Community annotation for 4LUD at PDBWiki (http://pdbwiki.org)

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