4MD2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand L2P, RET, SQL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


    • Primary referenceRadiation-induced signaling results in mitochondrial impairment in mouse heart at 4 weeks after exposure to X-rays., Barjaktarovic Z, Schmaltz D, Shyla A, Azimzadeh O, Schulz S, Haagen J, Dorr W, Sarioglu H, Schafer A, Atkinson MJ, Zischka H, Tapio S, PLoS One. 2011;6(12):e27811. doi: 10.1371/journal.pone.0027811. Epub 2011 Dec 8. PMID:22174747
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (4md2.pdb1.gz) 230 Kb
  • LPC: Ligand-Protein Contacts for 4MD2
  • CSU: Contacts of Structural Units for 4MD2
  • Structure Factors (1054 Kb)
  • Retrieve 4MD2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MD2 from S2C, [Save to disk]
  • Re-refined 4md2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MD2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4md2] [4md2_A]
  • SWISS-PROT database:
  • Domain found in 4MD2: [Bac_rhodopsin ] by SMART

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